Publications
List of publications and data sources that were used to generate the Meiotic Navigatorbeta.
Our publications
| Year | Description | Reference |
|---|---|---|
| 2022 | MeioNav | R.B. Correia, J.M. Almeida, M. Wyrwoll, I. Julca, D. Sobral, C.S. Misra, L.G. Guilgur, H. Schuppe, N. Silva, P. Prudêncio, A. Nóvoa, A.S. Leocádio, J. Bom, M. Mallo, S. Kliesch, M. Mutwil, L.M. Rocha, F. Tüttelmann, J.D. Becker, P. Navarro-Costa [2022]. "An old transcriptional program in male germ cells uncovers new causes of human infertility". bioRxiv: 10.1101/2022.03.02.482557v1 |
| 2021 | LowEnDe | R.B. Correia, P. Navarro-Costa, and L.M. Rocha [2020]. "Extraction of overlapping modules in networks via spectral methods and information theory". Complex Networks 2020. The 9th International Workshop on Complex Networks and Their Applications. Dec. 1-3, 2020, Madrid, Spain (Online). |
Publications from other groups used in our work
| Year | Description | Reference |
|---|---|---|
| 2021 | FlyBase | Aoife Larkin, Steven J Marygold, Giulia Antonazzo, Helen Attrill, Gilberto dos Santos, Phani V Garapati, Joshua L Goodman, L Sian Gramates, Gillian Millburn, Victor B Strelets, Christopher J Tabone, Jim Thurmond, FlyBase Consortium. [2021]. FlyBase: updates to the Drosophila melanogaster knowledge base. Nucleic Acids Res, 49(D1), D899–D907. doi: 10.1093/nar/gkaa1026 |
| 2019 | EggNOG | Jaime Huerta-Cepas, Damian Szklarczyk, Davide Heller, Ana Hernández-Plaza, Sofia K Forslund, Helen Cook, Daniel R Mende, Ivica Letunic, Thomas Rattei, Lars J Jensen, Christian von Mering, Peer Bork. [2019]. eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses. Nucleic Acids Res, 47(D1), D309–D314. doi: 10.1093/nar/gky1085 |
| 2005 | RNAi reagents | Lizabeth A Perkins, Laura Holderbaum, Rong Tao, Yanhui Hu, Richelle Sopko, Kim McCall, Donghui Yang-Zhou, Ian Flockhart, Richard Binari, Hye-Seok Shim, Audrey Miller, Amy Housden, Marianna Foos, Sakara Randkelv, Colleen Kelley, Pema Namgyal, Christians Villalta, Lu-Ping Liu, Xia Jiang, Qiao Huan-Huan, Xia Wang, Asao Fujiyama, Atsushi Toyoda, Kathleen Ayers, Allison Blum, Benjamin Czech, Ralph Neumuller, Dong Yan, Amanda Cavallaro, Karen Hibbard, Don Hall, Lynn Cooley, Gregory J Hannon, Ruth Lehmann, Annette Parks, Stephanie E Mohr, Ryu Ueda, Shu Kondo, Jian-Quan Ni, and Norbert Perrimon. [2015]. The Transgenic RNAi Project at Harvard Medical School: Resources and Validation. Genetics, 201(3) 843-52. doi: 10.1534/genetics.115.180208 |
| 2018 | RNA-Seq in insect testis | Viktor Vedelek, László Bodai, Gábor Grézal, Bence Kovács, Imre M. Boros, Barbara Laurinyecz & Rita Sinka. [2018]. Analysis of Drosophila melanogaster testis transcriptome. BMC Genomics, 19, 697. doi: 10.1186/s12864-018-5085-z |
| 2020 | Human infertility genes | Brendan J Houston, Antoni Riera-Escamilla, Margot J Wyrwoll, Albert Salas-Huetos, Miguel J Xavier, Liina Nagirnaja, Corinna Friedrich, Don F Conrad, Kenneth I Aston, Csilla Krausz, Frank Tüttelmann, Moira K O’Bryan, Joris A Veltman, Manon S Oud [2020]. A systematic review of the validated monogenic causes of human male infertility: 2020 update and a discussion of emerging gene–disease relationships. Human Reproduction Update, dmab030, doi: 10.1093/humupd/dmab030 |